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Dependency Graph Scanner: Duplicates, Phantoms, and Workspace Health

Understand how the Dependency Graph Scanner analyzes lockfiles to find duplicate packages, phantom dependencies, and workspace graph problems — and why these hidden issues make upgrades fragile.

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The Dependency Graph Scanner analyzes your lockfile and workspace structure to find structural problems in how packages resolve. It runs during a normal scan and feeds your DriftScore. This article is for developers debugging resolution surprises and for teams managing monorepos.

What it detects

  • Duplicate packages — the same package resolved at multiple versions in one tree, which inflates bundle size and creates subtle behavioral differences.
  • Phantom dependencies — packages your code imports but never declares in its manifest, relying on a transitive install that can vanish on the next lockfile change.
  • Workspace graphs — how packages in a monorepo depend on one another, so you can see internal coupling and resolution order.

Findings name the package, the versions involved, and where the problem lives in the graph.

Why it matters

Duplicates are a classic source of "two copies of the same library" bugs, where instance checks fail and state is split across versions. They also quietly grow your install and your attack surface. Phantom dependencies are a time bomb: the build works today because something else pulls the package in, but a routine upgrade can remove that path and break you with no manifest change to point at. In monorepos, an unhealthy workspace graph turns a single internal bump into a cascade of rebuilds.

Making these visible means an upgrade plan accounts for them instead of being derailed by them.

How to act

Scan the repository:

vg

For duplicates, decide on a single version and use your package manager's resolution or dedupe tooling to consolidate. For phantom dependencies, add them explicitly to the correct manifest so resolution no longer depends on luck. For workspace findings, look for unexpected cross-package edges and tighten boundaries.

Gate regressions in CI by comparing against a baseline:

vg scan --baseline .vibgrate/baseline.json

Triage tips

  • Fix phantom dependencies first — they are the most likely to break silently.
  • Consolidate duplicates of stateful or singleton libraries before cosmetic ones.
  • Use the workspace view to confirm your monorepo's dependency direction matches your intended architecture.

Related

Pair this scanner with the Dependency Risk Scanner and the Tooling Inventory Scanner for a complete picture of your supply chain. For exportable inventory, see the SBOM workflow and the Supply Chain Inventory guide.

Related Commands

Vibgrate CLI

See a real scan run

A replay of the actual CLI running against our test repositories — live progress, real findings, a genuine DriftScore. Nothing executes in your browser.

Replay
demo@vibgrate — bash
npx @vibgrate/cli scan
 
╭──────────────────────────────────────────╮
Vibgrate Drift Report
╰──────────────────────────────────────────╯
 
── node-turborepo (node) .
Runtime: >=18.0.0 (6 majors behind)
Frameworks:
Turbo: 1.13.4 → 2.10.12 (1 behind)
TypeScript: 5.9.3 → 7.0.2 (2 behind)
Dependencies:
1 current 1 1-behind 3 2+ behind 1 unknown
 
── @repo/admin (node) apps/admin
Frameworks:
TanStack Query: 5.102.5 → 5.102.5 (current)
React: 18.3.1 → 19.2.8 (1 behind)
React DOM: 18.3.1 → 19.2.8 (1 behind)
TypeScript: 5.9.3 → 7.0.2 (2 behind)
Vite: 5.4.21 → 8.2.2 (3 behind)
Dependencies:
3 current 9 1-behind 3 2+ behind 4 unknown
 
── @repo/api (node) apps/api
Frameworks:
Express: 4.22.2 → 5.2.1 (1 behind)
TypeScript: 5.9.3 → 7.0.2 (2 behind)
Vitest: 1.6.1 → 4.1.11 (3 behind)
Dependencies:
7 current 5 1-behind 3 2+ behind 4 unknown
 
── @repo/web (node) apps/web
Frameworks:
Next.js: 14.2.35 → 16.3.3 (2 behind)
React: 18.3.1 → 19.2.8 (1 behind)
React DOM: 18.3.1 → 19.2.8 (1 behind)
TypeScript: 5.9.3 → 7.0.2 (2 behind)
Dependencies:
2 current 6 1-behind 3 2+ behind 5 unknown
 
── @repo/config (node) packages/config
Frameworks:
TypeScript: 5.9.3 → 7.0.2 (2 behind)
Dependencies:
2 current 2 1-behind 5 2+ behind 0 unknown
 
── @repo/database (node) packages/database
Frameworks:
Prisma: 5.22.0 → 7.10.0 (2 behind)
TypeScript: 5.9.3 → 7.0.2 (2 behind)
Dependencies:
1 current 0 1-behind 3 2+ behind 1 unknown
 
── @repo/types (node) packages/types
Frameworks:
TypeScript: 5.9.3 → 7.0.2 (2 behind)
Dependencies:
0 current 0 1-behind 1 2+ behind 1 unknown
 
── @repo/ui (node) packages/ui
Frameworks:
React: 18.3.1 → 19.2.8 (1 behind)
TypeScript: 5.9.3 → 7.0.2 (2 behind)
React: 18.3.1 → 19.2.8 (1 behind)
Dependencies:
1 current 4 1-behind 1 2+ behind 1 unknown
 
── @repo/utils (node) packages/utils
Frameworks:
TypeScript: 5.9.3 → 7.0.2 (2 behind)
Vitest: 1.6.1 → 4.1.11 (3 behind)
Dependencies:
0 current 1 1-behind 2 2+ behind 1 unknown
 
Tech Stack
Frontend: React, React DOM
Meta-frameworks: Next.js
Bundlers: tsx, Turbo, Vite
CSS / UI: Autoprefixer, PostCSS, Tailwind CSS
Backend: Express
ORM / Database: Prisma, Prisma Client
Testing: Vitest
Lint & Format: ESLint, ESLint Prettier, ESLint React, Prettier, typescript-eslint
 
Services & Integrations
Auth: JWT 9.0.3
Databases: Prisma 5.22.0
 
TypeScript
v5.3.3 · strict ✔ · MIXED · target: ES2022
 
Build & Deploy
Package Managers: pnpm
Monorepo: npm-workspaces, pnpm-workspaces, turbo
 
Product Purpose Signals
Frameworks: react, nextjs
Evidence: 177
Top Signals:
- [heading] Dashboard (apps/admin/src/pages/Dashboard.tsx)
- [title] Revenue Overview (apps/admin/src/pages/Dashboard.tsx)
- [copy] workspace:* (packages/ui/package.json)
- [copy] ./dist (packages/ui/tsconfig.json)
- [copy] ./src/index.ts (packages/ui/package.json)
- [copy] @repo/config/tsconfig-base.json (packages/ui/tsconfig.json)
- [copy] @repo/ui (packages/ui/package.json)
- [copy] #3b82f6 (apps/admin/src/pages/Dashboard.tsx)
Unknowns:
- No pricing or billing evidence found.
- No integrations/connectors evidence found.
- No route structure evidence found.
 
Security Posture
Lockfile ✖ · .env ✔ · node_modules ✔
 
Platform
Native modules: turbo
 
Code Quality
Files: 36 · Functions: 183 · Avg complexity: 2.62 · Avg length: 21.13 lines
Max nesting: 2 · Circular deps: 0 · Dead code: 0%
God files: apps/admin/src/pages/Products (448 lines)
 
Database Schema
postgresql · 8 models · 1 enum
Models: Address, CartItem, Category, Order, OrderItem (+3 more)
 
Findings (16 errors, 11 warnings)
Node.js runtime ">=18.0.0" reached end-of-life on 2025-04-30 (latest: 24.0.0).
vibgrate/runtime-eol in .
TypeScript is 2 major versions behind (current: 5.9.3, latest: 7.0.2).
vibgrate/framework-major-lag in .
60% of dependencies are 2+ major versions behind in node-turborepo.
vibgrate/dependency-rot in .
@types/node is 6 major versions behind (spec: ^20.11.0, latest: 26.3.0).
vibgrate/dependency-major-lag in .
TypeScript is 2 major versions behind (current: 5.9.3, latest: 7.0.2).
vibgrate/framework-major-lag in apps/admin
Vite is 3 major versions behind (current: 5.4.21, latest: 8.2.2).
vibgrate/framework-major-lag in apps/admin
vite is 3 major versions behind (spec: ^5.0.12, latest: 8.2.2).
vibgrate/dependency-major-lag in apps/admin
TypeScript is 2 major versions behind (current: 5.9.3, latest: 7.0.2).
vibgrate/framework-major-lag in apps/api
Vitest is 3 major versions behind (current: 1.6.1, latest: 4.1.11).
vibgrate/framework-major-lag in apps/api
@types/node is 6 major versions behind (spec: ^20.11.0, latest: 26.3.0).
vibgrate/dependency-major-lag in apps/api
vitest is 3 major versions behind (spec: ^1.2.1, latest: 4.1.11).
vibgrate/dependency-major-lag in apps/api
Next.js is 2 major versions behind (current: 14.2.35, latest: 16.3.3).
vibgrate/framework-major-lag in apps/web
TypeScript is 2 major versions behind (current: 5.9.3, latest: 7.0.2).
vibgrate/framework-major-lag in apps/web
@types/node is 6 major versions behind (spec: ^20.11.0, latest: 26.3.0).
vibgrate/dependency-major-lag in apps/web
TypeScript is 2 major versions behind (current: 5.9.3, latest: 7.0.2).
vibgrate/framework-major-lag in packages/config
56% of dependencies are 2+ major versions behind in @repo/config.
vibgrate/dependency-rot in packages/config
eslint-plugin-react-hooks is 3 major versions behind (spec: ^4.6.0, latest: 7.1.1).
vibgrate/dependency-major-lag in packages/config
Prisma is 2 major versions behind (current: 5.22.0, latest: 7.10.0).
vibgrate/framework-major-lag in packages/database
TypeScript is 2 major versions behind (current: 5.9.3, latest: 7.0.2).
vibgrate/framework-major-lag in packages/database
75% of dependencies are 2+ major versions behind in @repo/database.
vibgrate/dependency-rot in packages/database
TypeScript is 2 major versions behind (current: 5.9.3, latest: 7.0.2).
vibgrate/framework-major-lag in packages/types
100% of dependencies are 2+ major versions behind in @repo/types.
vibgrate/dependency-rot in packages/types
TypeScript is 2 major versions behind (current: 5.9.3, latest: 7.0.2).
vibgrate/framework-major-lag in packages/ui
TypeScript is 2 major versions behind (current: 5.9.3, latest: 7.0.2).
vibgrate/framework-major-lag in packages/utils
Vitest is 3 major versions behind (current: 1.6.1, latest: 4.1.11).
vibgrate/framework-major-lag in packages/utils
67% of dependencies are 2+ major versions behind in @repo/utils.
vibgrate/dependency-rot in packages/utils
vitest is 3 major versions behind (spec: ^1.2.1, latest: 4.1.11).
vibgrate/dependency-major-lag in packages/utils
 
╭──────────────────────────────────────────╮
Top Priority Actions
╰──────────────────────────────────────────╯
 
1. Upgrade EOL runtime in node-turborepo
End-of-life runtimes no longer receive security patches and block ecosystem upgrades.
./.
>=18.0.0 → 24.0.0 (6 majors behind)
Impact: −10 drift points (runtime & EOL)
 
2. Fix security posture: no lockfile found
Without a lockfile, installs are non-deterministic. Run the install command to generate one and commit it.
./
Missing: package-lock.json, pnpm-lock.yaml, or yarn.lock
 
3. Upgrade Vite 5.4.21 → 8.2.2 in @repo/admin (+2 more)
3 major versions behind. Major framework drift increases breaking change risk and blocks access to security fixes and performance improvements.
./apps/admin
Vite: 5.4.21 → 8.2.2 (3 majors behind)
./apps/api
Vitest: 1.6.1 → 4.1.11 (3 majors behind)
./packages/utils
Vitest: 1.6.1 → 4.1.11 (3 majors behind)
Impact: −5–15 drift points
 
4. Reduce dependency rot in @repo/types (100% severely outdated)
1 of 1 dependencies are 2+ majors behind. Run `npm outdated` and prioritise packages with known CVEs or breaking API changes.
./packages/types
typescript: 5.9.3 → 7.0.2 (2 majors behind)
Impact: −5–10 drift points
 
5. Reduce dependency rot in @repo/database (75% severely outdated)
3 of 4 dependencies are 2+ majors behind. Run `npm outdated` and prioritise packages with known CVEs or breaking API changes.
./packages/database
@prisma/client: 5.22.0 → 7.10.0 (2 majors behind)
prisma: 5.22.0 → 7.10.0 (2 majors behind)
typescript: 5.9.3 → 7.0.2 (2 majors behind)
Impact: −5–10 drift points
 
╭──────────────────────────────────────────╮
Architecture Layers
╰──────────────────────────────────────────╯
 
Archetype: nextjs (80% confidence)
Files classified: 24 (11 unclassified)
Folders classified: 8
apps/admin/src presentation 100% 4 files
apps/admin/src/pages presentation 100% 2 files
apps/api/src/middleware middleware 100% 2 files
apps/api/src/routes routing 100% 2 files
apps/web/src/app presentation 100% 4 files
apps/web/src/app/products presentation 100% 2 files
apps/web/src/app/products/[id] presentation 100% 1 file
packages/ui/src presentation 100% 6 files
Unclassified source (sample): 11
 
presentation 15 files drift ████████████████████ 100 risk high
routing 4 files drift ████████████████████ 100 risk high
middleware 2 files drift ███████▍░░░░░░░░░░░░ 37 risk moderate
config 2 files drift ░░░░░░░░░░░░░░░░░░░░ 0 risk none
shared 1 file drift ████████████████████ 100 risk high
 
╭──────────────────────────────────────────╮
DriftScore Summary
╰──────────────────────────────────────────╯
 
DriftScore: 66/100
Risk Level: HIGH
Projects: 9
Classified: 8 nano · 1 micro · 0 small · 0 standard
Billable: 0.42 · 9 detected → 0.42 billable projects (micro-project pricing)
0.1 micro · 0.32 nano
These fractions add up across repositories, then round down to whole billable projects.
 
Score Breakdown
Runtime: ████████████████████ 100
Frameworks: █████████▏░░░░░░░░░░ 46
Dependencies: ██████▏░░░░░░░░░░░░░ 31
EOL Risk: ████████████████████ 100
 
Scanned at 2026-08-26T09:08:28.481Z · 7.1s · 286 files scanned · 56 workspace files · 27 dirs
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